Flights from Manila (MNL) to El Nido (ENI)

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Manila to El Nido Flight Information

Find the Cheapest Flights from Manila (MNL) to El Nido (ENI)

Work hard, travel harder! Wotif brings you the cheapest Manila to El Nido flights, making it possible to have a five star holiday without that five star price tag. Browse and compare our top MNL to ENI routes and airport options. So, go ahead and treat yourself, your sweetheart, or the kids to an unforgettable holiday this year.

to Information

Traveling From
Ninoy Aquino Intl.
Origin Airport
Origin Airport IATA Code
MNL
Traveling To
El Nido
Destination Airport
Destination Airport IATA Code
ENI
Number of Airlines Serving
Average Flight Time
hours mins
Direct Flight Time
hours mins
Flight Price
Address:
El Nido ,
Philippines
IATA code:
ENI
Longitude:
119.413979
Latitude:
11.203469
Time zone:
Asia/Manila
Address:
Manila ,
Philippines
IATA code:
MNL
Longitude:
121.019208
Latitude:
14.511205
Time zone:
Asia/Manila

Manila to El Nido Flight Deals from

Considering a quick trip to El Nido, but not sure which is the best route for you? Well, you’re in luck! Wotif has done the hard work, so all you need to do is check out these flights from MNL to ENI. With heaps of cheap fares from Manila, we guarantee you’ll be arriving to your holiday destination in style without emptying your bank account in the process.

It’s easy to book flights to El Nido from Manila  

For a huge choice of flights, simply enter your travel dates and hit search and we’ll hunt out fantastic deals on one-way, return and multi-city airfares to El Nido from Manila from different airlines. If you click the ‘direct flights’ box, you see flights that’ll get you to El Nido in just hour(s) and mins, too.   

Snap up great deals on flights to El Nido from Manila 

Choose from flights a day on average, with prices starting at and rising to depending on the cabin class, travel dates, and airline carrier. And if you’re up for a last-minute getaway, you can get great deals on flights from Manila to El Nido today!  

Find cheap airfares to El Nido from Manila 

Here are our insider tips for bagging a flight bargain: 

  • Look for midweek flights and late night, early morning arrival and departure times
  • Check out other airports near Manila and El Nido
  • Avoid peak season (prices tend to be lower in )
  • Be flexible with your travel dates and you can usually get cheaper options  

Reasons to book your flights to El Nido from Manila with Wotif

Wotif is a super-easy way to find the best flight for you to El Nido. Get more bang for your buck on flight and hotel or car rental combos and download the free Wotif app to tap into exclusive deals. Book now with Wotif and have a great flight!

 

Great places to stay after flight from Manila to El Nido

Seda Lio El Nido Palawan

Seda Lio El Nido Palawan

5 out of 5
Lio Tourism Estate El Nido Mimaropa
The price is NZ$653 per night from 5 Apr to 6 Apr
NZ$653
5 Apr - 6 Apr
includes taxes & fees
Stay at this luxury hotel in El Nido. Enjoy free breakfast, free Wi-Fi and free parking. Our guests praise the helpful staff in their reviews. Popular attractions ...
9/10 Wonderful! (336 reviews)
Our family of 4 all adults enjoyed everything about this resort. I am so glad we stayed here, this is the best area to stay in the area

Reviewed on 11 Mar 2026

Seda Lio El Nido Palawan
Charlie's El Nido

Charlie's El Nido

3.5 out of 5
Km 279 National Highway El Nido Palawan
Stay at this spa hotel in El Nido. Enjoy free Wi-Fi, free parking and a full-service spa. Our guests praise the helpful staff in their reviews. Popular attractions ...
9/10 Wonderful! (133 reviews)
Staff was delightful. Kind and attentive. Pool also lovely. Location is far from town centre with infrequent shuttle frequency. Room unfortunately the size of a coffin and problematic at best. Woke up to a bathroom flood second morning and A/C worked properly about half of our stay as well as leaked ...

Reviewed on 8 Mar 2026

Charlie's El Nido
Lakwa Motel Lio

Lakwa Motel Lio

3 out of 5
Kalye Artisano, Lio Tourism Estate El Nido Palawan
Stay at this motel in El Nido. Enjoy on-site spa services, a garden and dry cleaning or laundry services. Popular attractions El Nido Main Beach and Lio Beach ...
10/10 Exceptional! (11 reviews)
We loved our stay at Lawka! The location in Lio was great and being in the Kayle Artisano complex gave us access to some fun shops and restaurants. The room was very accommodating and modern. The staff was helpful and having a scooter included with the room is a huge plus. Also a huge shoutout to ...

Reviewed on 15 Jan 2026

Lakwa Motel Lio
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

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^Savings based on all package bookings made with Flight + Hotel on Wotif.co.nz from , as compared to the price of the same components booked separately. Savings will vary based on origin/destination, length of trip, stay dates and selected travel supplier(s). Savings not available on all packages.