Best Airfare Deals to San Diego County

Change your flight without a fee on select flights

Money Saving Bundle when you purchase Hotel + Flight! 

Get mobile alerts about flight delays, gate changes and more with the FREE Wotif app

Get a great flight deal to San Diego County's top cities

OriginDestinationTravel datesFlights from*
SEAPalm SpringsApril 6 to April 9NZ$752
*Prices include taxes and fees

Find The Perfect Hotel For After Your Flight

Score Epic San Diego County Accommodation Deals

Pleasant Inn

Pleasant Inn

2.5 out of 5
5550 Clairemont Mesa Blvd San Diego CA
The price is NZ$184 per night from 9 Apr to 10 Apr
NZ$184
per night
9 Apr - 10 Apr
Stay at this hotel in San Diego. Enjoy free Wi-Fi, free parking and a 24-hour front desk. Our guests praise the helpful staff and the convenient parking in their ...
8.4/10 Very Good! (1,341 reviews)
Staff was great, rooms are in need of an update

Reviewed on 21 Mar 2026

Opens in a new windowPleasant Inn
E-Z 8 Motel Old Town

E-Z 8 Motel Old Town

2.5 out of 5
4747 Pacific Highway San Diego CA
The price is NZ$138 per night from 29 Mar to 30 Mar
NZ$138
per night
29 Mar - 30 Mar
Stay at this business-friendly hotel in San Diego. Enjoy free parking, Wi-Fi (surcharge) and a 24-hour front desk. Our guests praise the helpful staff and the ...
6.6/10 (2,102 reviews)
No, creepy people all around that appear to live there. Didn’t feel safe at all, room smelled, bed needs replaced, no shampoo for guests. Mostly creepy.

Reviewed on 19 Mar 2026

Opens in a new windowE-Z 8 Motel Old Town
Kings Inn San Diego

Kings Inn San Diego

2.5 out of 5
1333 Hotel Cir S San Diego CA
Stay at this hotel in San Diego. Enjoy free Wi-Fi, 2 restaurants and breakfast (surcharge). Our guests praise the breakfast and the pool in their reviews. Popular ...
8.8/10 Excellent! (3,635 reviews)
Fast and easy check-in. Friendly staff. Rooms were cleaned daily. Wi-fi worked good. Great outdoor pool. Cons - designated smoking area beside the pool. Note: breakfast and parking not included in hotel rate

Reviewed on 21 Mar 2026

Opens in a new windowKings Inn San Diego
Save an average of 15% on thousands of hotels when you're signed in
Days Inn by Wyndham Mission Valley/SDSU

Days Inn by Wyndham Mission Valley/SDSU

2 out of 5
5343 Adobe Falls Rd San Diego CA
The price is NZ$176 per night from 19 Apr to 20 Apr
NZ$176
per night
19 Apr - 20 Apr
Stay at this hotel in San Diego. Enjoy free Wi-Fi, a fitness centre and parking (surcharge). Our guests praise the clean rooms in their reviews. Popular attractions ...
5.8/10 (1,001 reviews)
I didn’t expect much for the price but it still managed to shock me. It appeared the room wasn’t even cleaned to be honest. The tv didn’t work, internet didn’t work (yes we logged in), and they had no clean towels so we did not receive fresh towels for our entire stay. There also appeared to be no ...

Reviewed on 19 Mar 2026

Opens in a new windowDays Inn by Wyndham Mission Valley/SDSU
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Hotels With Airport Transportation

Wyndham San Diego Bayside

Wyndham San Diego Bayside

4 out of 5
1355 N Harbor Drive San Diego CA
The price is NZ$362 per night from 29 Mar to 30 Mar
NZ$362
per night
29 Mar - 30 Mar
Stay at this business-friendly hotel in San Diego. Enjoy free Wi-Fi, 3 restaurants and breakfast (surcharge). Our guests praise the pool and the restaurant in ...
8.4/10 Very Good! (6,065 reviews)
Everything was great and loved the views!

Reviewed on 21 Mar 2026

Opens in a new windowWyndham San Diego Bayside
Sheraton San Diego Resort

Sheraton San Diego Resort

4 out of 5
1380 Harbor Island Dr San Diego CA
The price is NZ$320 per night from 3 Apr to 4 Apr
NZ$320
per night
3 Apr - 4 Apr
Stay at this business-friendly hotel in San Diego. Enjoy free Wi-Fi, 3 outdoor pools and 5 restaurants. Our guests praise the pool and the restaurant in their ...
8.4/10 Very Good! (3,384 reviews)
The room had a broken outlet but enough for me to use else where. However, my biggest issue was the lack of privacy and the cost cutting door they provide for bathroom. With the "budget" room they have a sliding slated barn door. For the price of this room I'm disappointed in the privacy, or lack ...

Reviewed on 19 Mar 2026

Opens in a new windowSheraton San Diego Resort
Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG

2.5 out of 5
1955 San Diego Ave San Diego CA
The price is NZ$562 per night from 20 Apr to 21 Apr
NZ$562
per night
20 Apr - 21 Apr
Stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free Wi-Fi and a free airport shuttle. Our guests praise the breakfast and the helpful ...
9.2/10 Wonderful! (1,063 reviews)
The room was clean and it was a great location. Still close to downtown San Diego

Reviewed on 18 Mar 2026

Opens in a new windowHoliday Inn Express San Diego Airport - Old Town by IHG
Save an average of 15% on thousands of hotels when you're signed in
Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town

3 out of 5
4041 Harney St San Diego CA
The price is NZ$263 per night from 5 Apr to 6 Apr
NZ$263
per night
5 Apr - 6 Apr
Stay at this business-friendly hotel in San Diego. Enjoy free Wi-Fi, a free airport shuttle and a free cruise terminal shuttle. Our guests praise the helpful ...
8.4/10 Very Good! (1,934 reviews)
Microwave and refrigerator worked perfectly. Great location Highly Recommended.

Reviewed on 20 Mar 2026

Opens in a new windowBest Western Plus Hacienda Hotel Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Score Epic San Diego County Accommodation Deals

Days Inn by Wyndham Mission Valley/SDSU

Days Inn by Wyndham Mission Valley/SDSU

2 out of 5
5343 Adobe Falls Rd San Diego CA
The price is NZ$176 per night from 19 Apr to 20 Apr
NZ$176
19 Apr - 20 Apr
includes taxes & fees
Stay at this hotel in San Diego. Enjoy free Wi-Fi, a fitness centre and parking (surcharge). Our guests praise the clean rooms in their reviews. Popular attractions ...
5.8/10 (1,001 reviews)
I didn’t expect much for the price but it still managed to shock me. It appeared the room wasn’t even cleaned to be honest. The tv didn’t work, internet didn’t work (yes we logged in), and they had no clean towels so we did not receive fresh towels for our entire stay. There also appeared to be no ...

Reviewed on 19 Mar 2026

Opens in a new windowDays Inn by Wyndham Mission Valley/SDSU
Staybridge Suites Carlsbad by IHG

Staybridge Suites Carlsbad by IHG

3 out of 5
2735 Palomar Airport Road Carlsbad CA
The price is NZ$325 per night from 12 Apr to 13 Apr
NZ$325
12 Apr - 13 Apr
includes taxes & fees
Stay at this business-friendly hotel in Carlsbad. Enjoy free breakfast, free Wi-Fi and free parking. Our guests praise the breakfast and the helpful staff in ...
9/10 Wonderful! (1,001 reviews)
Very clean we really stay again

Reviewed on 21 Mar 2026

Opens in a new windowStaybridge Suites Carlsbad by IHG
Studio 6 Carlsbad, CA

Studio 6 Carlsbad, CA

3.5 out of 5
5010 Avenida Encinas Carlsbad CA
Stay at this business-friendly hotel in Carlsbad. Enjoy free Wi-Fi, free parking and a 24-hour front desk. Our guests praise the clean rooms in their reviews. ...
Opens in a new windowStudio 6 Carlsbad, CA
Save an average of 15% on thousands of hotels when you're signed in
Homewood Suites by Hilton Carlsbad-North San Diego County

Homewood Suites by Hilton Carlsbad-North San Diego County

3 out of 5
2223 Palomar Airport Rd Carlsbad CA
The price is NZ$351 per night from 19 Apr to 20 Apr
NZ$351
19 Apr - 20 Apr
includes taxes & fees
Stay at this hotel in Carlsbad. Enjoy free breakfast, free Wi-Fi and a fitness centre. Our guests praise the breakfast and the helpful staff in their reviews. ...
8.6/10 Excellent! (1,004 reviews)
Everyone was super welcoming despite showing up for a late check-in. When asked for extra pillows and blankets they were very accommodating.

Reviewed on 20 Mar 2026

Opens in a new windowHomewood Suites by Hilton Carlsbad-North San Diego County
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Family Friendly Hotels in

Bahia Resort Hotel

Bahia Resort Hotel

3.5 out of 5
998 W Mission Bay Dr San Diego CA
The price is NZ$519 per night from 19 Apr to 20 Apr
NZ$519
per night
19 Apr - 20 Apr
Stay at this beach resort in San Diego. Enjoy a beach locale, breakfast (surcharge) and 24-hour room service. Our guests praise the pool and the restaurant in ...
8.6/10 Excellent! (1,922 reviews)
We were away from the hotel every day but felt safe and comfortable returning. Our room was in the "back" of the hotel. Very quiet. The restaurants in site were expensive but we took advantage of the Airstream. Delicious breakfasts

Reviewed on 19 Mar 2026

Opens in a new windowBahia Resort Hotel
Carlsbad By The Sea Hotel

Carlsbad By The Sea Hotel

3 out of 5
850 Palomar Airport Road Carlsbad CA
Stay at this business-friendly hotel in Carlsbad. Enjoy a 24-hour front desk, a 24-hour business centre and daily housekeeping. Our guests praise the pool and ...
7.8/10 Good! (1,834 reviews)
Why I gave one star due to the facts is the room water issues. Either is a super cold or a steamy hot water. It’s not safe for my two young kids to shower either they’re getting sick or getting burn. I called the front desk and the maintenance gentleman came up to our room and couldn’t solved the ...

Reviewed on 20 Mar 2026

Opens in a new windowCarlsbad By The Sea Hotel
The Dana on Mission Bay

The Dana on Mission Bay

3.5 out of 5
1710 W Mission Bay Dr San Diego CA
The price is NZ$402 per night from 5 Apr to 6 Apr
NZ$402
per night
5 Apr - 6 Apr
Stay at this hotel in San Diego. Enjoy 2 outdoor pools, a marina and 2 hot tubs. Our guests praise the pool and the restaurant in their reviews. Popular attractions ...
9/10 Wonderful! (4,176 reviews)
I love the jr suite with the bay view. Clean, large, and confortable.

Reviewed on 21 Mar 2026

Opens in a new windowThe Dana on Mission Bay
Save an average of 15% on thousands of hotels when you're signed in
Catamaran Resort and Spa

Catamaran Resort and Spa

4 out of 5
3999 Mission Boulevard San Diego CA
The price is NZ$563 per night from 19 Apr to 20 Apr
NZ$563
per night
19 Apr - 20 Apr
Stay at this beach resort in San Diego. Enjoy free Wi-Fi, a full-service spa and a beach locale. Our guests praise the helpful staff and the clean rooms in their ...
8.6/10 Excellent! (1,197 reviews)
Rooms were run down, bathrooms were gross

Reviewed on 21 Mar 2026

Opens in a new windowCatamaran Resort and Spa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Need a Car For After Your Flight?

San Diego County Flights

Hey traveller, when it’s time to hit the road you’ve got to go big, because you’re not going home…yet. When you book San Diego County flights through Wotif, you’re on the way to adventure. Whether this is a first-time or repeat visit, you’ll add tons of snaps to your photo album—and you just might discover some new favourite stomping grounds along the way! From whirlwind international tours to quiet escapes for a little R&R, you’ll find the best deals on airfares right here.

What is the lowest price on Wotif for a flight to San Diego County?
Flights to San Diego County start as low as NZ$752. Once you’ve snagged your flight, it’s time to build that itinerary. If your flight touches down in a bustling city, you’ll want a head start, so you can get from jet-way to getaway as quickly as possible. Flying for business? Squeeze in some sightseeing and a snack at a locally loved restaurant between meetings—you’ll have plenty of cash thanks to our cheap business class flights to San Diego County. You know what they say about all work and no play, after all.

What are the most popular airlines that fly to San Diego County?
Alaska Airlines

Pack your favourite magazines or stack your video queue for a mini-marathon of that television show your co-workers have been raving about. And if you get hooked a few episodes in, don’t worry; there’s always the return flight to finish the binge. Ready to book cheap flights to San Diego County? Check out our selection of airfares and start putting together a holiday that fits your schedule and price range. We offer sweet deals, so you don’t have to move mountains to see the world. In fact, we’ll help you get to those mountains (or ocean, or forest) today!

More Destinations