Boutique Hotels Japan
More than just hotels
Apartments, cabins, holiday rentals and more, plus millions of reviews from Aussie & Kiwi travellers
Flexibility matters
24/7 support, so you can book with confidence
Relax with our Price Promise
Find a lower price on a hotel or package online, before your stay, and we'll refund the difference^
Discover these top cities in Japan
Kyoto
Boutique Hotels
Boutique Hotels in Japan
The Screen
640-1 Shimogoryomae-cho Kyoto Kyoto
The price is NZ$325 per night
NZ$325
21 Dec - 22 Dec
Stay at this boutique hotel in Kyoto. Enjoy free Wi-Fi, a rooftop terrace and breakfast (surcharge). Our guests praise the helpful staff in their reviews. Popular attractions Kyoto Imperial Palace and Pontocho Alley are located nearby.
Free WiFi
Restaurant
Hotel Kanra Kyoto
190 Kitamachi, Karasuma-dori Kyoto Kyoto
The price is NZ$441 per night
NZ$441
12 Jan - 13 Jan 2026
Stay at this spa hotel in Kyoto. Enjoy free Wi-Fi, a full-service spa and breakfast (surcharge). Our guests praise the breakfast and the restaurant in their reviews. Popular attractions Kyoto Tower and Kawaramachi Street are located nearby.
Spa
Free WiFi
Free cancellation
Reserve now, pay when you stay
The Capitol Hotel Tokyu
2-10-3 Nagata-cho Tokyo Tokyo-to
The price is NZ$1,021 per night
NZ$1,021
5 Jan - 6 Jan 2026
Stay at this luxury hotel in Tokyo. Enjoy a full-service spa, 3 restaurants and 2 bars/lounges. Our guests praise the helpful staff and the property condition in their reviews. Popular attractions Tokyo Imperial Palace and Tokyo Tower are located nearby.
Pool
Hot tub
Free cancellation
Reserve now, pay when you stay
Solaria Nishitetsu Hotel Ginza
4-9-2 Ginza, Chuo-ku Tokyo Tokyo-to
The price is NZ$298 per night
NZ$298
5 Jan - 6 Jan 2026
Stay at this boutique hotel in Tokyo. Enjoy free Wi-Fi, breakfast (surcharge) and in-room massages. Our guests praise the helpful staff and the clean rooms in their reviews. Popular attractions Tokyo Imperial Palace and Tokyo Tower are located nearby.
Free WiFi
Restaurant
Free cancellation
The Peninsula Tokyo
1-8-1 Yuraku-cho Tokyo Tokyo-to
The price is NZ$1,347 per night
NZ$1,347
4 Jan - 5 Jan 2026
Stay at this luxury hotel in Tokyo. Enjoy free Wi-Fi, a full-service spa and 2 coffee shops/cafes. Our guests praise the helpful staff in their reviews. Popular attractions Tokyo Imperial Palace and Tokyo Tower are located nearby.
Pool
Spa
Akan Tsuruga Bessou HINANOZA
2-8-1 Akanko-onsen Akan Kushiro Hokkaido
The price is NZ$1,170 per night
NZ$1,170
17 Dec - 18 Dec
Stay at this boutique resort in Kushiro. Enjoy free breakfast, free Wi-Fi and free parking. Popular attractions Lake Akan and Akankohan Eco Museum Center are located nearby.
Breakfast included
Parking included
Gagakuan
223-13 Kamiyanagichou, Youbai Street Kyoto Kyoto
Stay at this boutique holiday home in Kyoto. Enjoy free Wi-Fi, parking (surcharge) and a garden. Popular attractions Kyoto Tower and Kawaramachi Street are located nearby.
Kitchen
Free WiFi
Hotel Chinzanso Tokyo
2-10-8 Sekiguchi, Bunkyo-ku Tokyo Tokyo
Stay at this luxury hotel in Tokyo. Enjoy a full-service spa, 7 restaurants and hot springs on-site. Our guests praise the helpful staff and the clean rooms in their reviews. Popular attractions Tokyo Dome and Tokyo Imperial Palace are located nearby.
Pool
Hot tub
Free cancellation
Reserve now, pay when you stay
HOTEL IL PALAZZO
3-13-1 Haruyoshi, Chuo Ku Fukuoka Fukuoka-ken
The price is NZ$299 per night
NZ$299
6 Jan - 7 Jan 2026
Stay at this boutique hotel in Fukuoka. Enjoy free breakfast, free Wi-Fi and parking (surcharge). Popular attractions Canal City Hakata and Port of Hakata are located nearby.
Breakfast included
Free WiFi
Free cancellation
Reserve now, pay when you stay
Hotel La Neige
Happo Wadanonomori Hakuba Nagano-ken
The price is NZ$1,248 per night
NZ$1,248
12 Jan - 13 Jan 2026
Stay at this luxury hotel in Hakuba. Enjoy free Wi-Fi, free parking and breakfast (surcharge). Our guests praise the helpful staff in their reviews. Popular attractions Hakuba Happo-One Ski Area and Hakuba Iwatake Ski Resort are located nearby.
Spa
Parking included
Hotel La Suite Kobe Harborland
7-2 Hatoba-cho Kobe Hyogo-ken
The price is NZ$495 per night
NZ$495
8 Jan - 9 Jan 2026
Stay at this luxury hotel in Kobe. Enjoy free Wi-Fi, 2 restaurants and breakfast (surcharge). Our guests praise the property condition in their reviews. Popular attractions Kobe Harborland and Port of Kobe are located nearby.
Spa
Free WiFi
Hotel Mystays Premier Dojima
2-4-1 Sonezakishinchi Osaka Osaka-fu
The price is NZ$99 per night
NZ$99
12 Jan - 13 Jan 2026
Stay at this hotel in Osaka. Enjoy free Wi-Fi, breakfast (surcharge) and in-room massages. Our guests praise the property condition in their reviews. Popular attractions Osaka Castle and Dotonbori are located nearby.
Free WiFi
Restaurant
Free cancellation
Reserve now, pay when you stay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Japan Boutique Hotels
If your favourite holidays involve chilling out off the beaten path, then boutique hotels in Japan are where it’s at. But what is a boutique hotel anyway? Picture a space with super-cool décor and personalised service. Throw in a smaller space with fewer guests to run into and—what? Okay, we’ll see you there.
All about boutique accommodation
Q: What makes boutique accommodation special?
A: Boutique hotels come in all stripes. Some are situated in old townhouses, while others more resemble modern lofts. There are 39,737 hotels in Japan, so take a peek and see what’s on offer!
Q: What kind of service can I expect at a Japan boutique hotel?
A: Boutique hotels tend to be smaller establishments, and host fewer guests at a time. This means the staff has more time to produce personalised service for each guest. Look through reviews on Wotif and see what other travellers have had to say about their stays and the staff.
Q: This sounds great! Can I afford a boutique hotel?
A: You sure can! Rates range from NZ$99 to NZ$1,347. Find the right place at the right price and be on your way.
Book a boutique getaway today
There’s nothing like Japan boutique accommodation for the traveller who wants a one-of-a-kind experience mixed with the convenience that makes a holiday care-free. Wotif is here to help you score the perfect hotel for your next getaway—so stop reading, and start booking!
Japan Boutique Hotels essential information
Boutique Hotels in Japan |
88 |
|---|---|
Highest price | NZ$1,347 |
Cheapest price | NZ$99 |
Total number of hotels in Japan | 39,737 |
Popular hotels | The Screen, Hotel Kanra Kyoto, The Capitol Hotel Tokyu, Solaria Nishitetsu Hotel Ginza, The Peninsula Tokyo, Akan Tsuruga Bessou HINANOZA, Gagakuan, Hotel Chinzanso Tokyo, HOTEL IL PALAZZO, Hotel La Neige, Hotel La Suite Kobe Harborland, Hotel Mystays Premier Dojima |
New reviews! Best hotels in Japan
Wotif Verified Review
5 / 5
Very comvienr location. Rooms are clean and comfortable.
A verified traveller stayed at Hotel Villa Fontaine Grand Haneda Airport
Posted 1 day ago
Destinations with Boutique Hotels
Hotel themes
Popular types of accommodation
Near an Attraction
Top hotels
More destinations for you
Hotels
Flights
Packages
- South Korea Holiday Packages
- Taiwan Holiday Packages
- Maldives Holiday Packages
- Vietnam Holiday Packages
- Thailand Holiday Packages
- Singapore Holiday Packages
- Philippines Holiday Packages
- China Holiday Packages
- Indonesia Holiday Packages
- Malaysia Holiday Packages
- Cambodia Holiday Packages
- Sri Lanka Holiday Packages